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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18901791_18902802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18901791 - 18902802

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATAGGTAAATA

Flanking Amino Acid:

RNMYTVQNNTGPYFNPRSRQ

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

42.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.5

0.66

0.9

77.2

37.1

Minor 5ss

32.2

-2

3.1

41.1

45.2

Minor BPS

41.4

-0.6

2.5

56.7

Associated Gene:

Gene:

ZMAT3

Ensembl Gene ID:

ENSAPLG00000013292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013836

18898312 - 18905972

7661

ENSAPLT00000021193

18896145 - 18903827

7683