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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18943050_18947132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18943050 - 18947132

Intron Length:

4083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCG

5'SS Class:

major

3'SS Sequence:

GATTTCTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TCCCTCTGATTT

Flanking Amino Acid:

NEETMKINSECSYIPKCGKN

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

41.5

Major BPS

0.72

38.9

Major PPT

78.1

0.63

0.9

69.6

41.3

Minor 5ss

29.4

-2.4

3.5

38.7

46.6

Minor BPS

47.2

-0.1

1.7

61.31

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029660

18941765 - 19025132

83368

ENSAPLT00000024141

18941765 - 19067848

126084

ENSAPLT00000013986

18942765 - 18980760

37996

ENSAPLT00000034863

18942765 - 19067788

125024