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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18949870_18955836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18949870 - 18955836

Intron Length:

5967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAACCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTATTTTCAACC

Flanking Amino Acid:

SSTSYRHDEKRNIYQKIRDH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

36.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.63

0.8

75.4

33.2

Minor 5ss

32.4

-2

3.3

43.9

Minor BPS

66.5

0.5

1.5

75.01

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029660

18941765 - 19025132

83368

ENSAPLT00000024141

18941765 - 19067848

126084

ENSAPLT00000013986

18942765 - 18980760

37996

ENSAPLT00000043757

18945849 - 19025132

79284