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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18955948_19024942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18955948 - 19024942

Intron Length:

68995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GTGACAAAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.61

0.7

68.9

31.6

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

43.9

-0.3

2.1

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020595

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043757

18945849 - 19025132

79284

ENSAPLT00000029660

18941765 - 19025132

83368