Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_19159487_19162514_R

Intron Information:

Intron Rank:

153613

Intron Class:

major

Intron Phase:

Intron Coordinates:

19159487 - 19162514

Intron Length:

3028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

0.9

76.9

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.3

0.97

0.7

89.4

25.4

Minor 5ss

31.2

-2.2

32.2

42.1

Minor BPS

63.9

0.52

1.5

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020076

19159190 - 19163738

4549