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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1918411_1939268_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1918411 - 1939268

Intron Length:
20858

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGGCAT

5'SS Class:
major

3'SS Sequence:
TCTCTCATTTAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCATAAT

U12 Branch Point Sequence:
TCTCTCTCATTT

Flanking Amino Acid:
SSDSRMRTKELFEFMNFLAE

Intron Amino Acid Position:
363

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.7
1
69.6
42.7

Major BPS
75.2
0.63
1.1
74.5
36.6

Major PPT
72.6
0.51
1
76.2
31.2

Minor 5ss
31
-2.2
3.6
46.2
49.1

Minor BPS
49.4
0.03
1.8
68.97
42.5

Associated Gene:

Gene:
SLC9A9

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1821682 - 2036835
215154

1821682 - 2036835
215154