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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19404451_19406316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19404451 - 19406316

Intron Length:

1866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCATAATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTTCCCATAATG

Flanking Amino Acid:

GEENGAHTIANNHTDMMEVD

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

77.8

33.2

Major BPS

0.82

0.8

83.9

25.3

Major PPT

68.5

0.42

62.3

37.2

Minor 5ss

41.3

-1

2.8

49.5

41.2

Minor BPS

66.7

0.39

1.7

74.18

37.9

Associated Gene:

Gene:

TBL1XR1

Ensembl Gene ID:

ENSAPLG00000013445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014067

19357704 - 19415674

57971