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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19409201_19410361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19409201 - 19410361

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATATCT

Flanking Amino Acid:

EAKQQFPFHSAPALDVDWQS

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

88.9

24.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

82.9

0.74

0.7

81.2

30.8

Minor 5ss

39.5

-1.2

2.8

48.3

41.8

Minor BPS

58.9

0.36

2.1

86.36

39.1

Associated Gene:

Gene:

TBL1XR1

Ensembl Gene ID:

ENSAPLG00000013445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014067

19357704 - 19415674

57971