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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19750490_19756642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19750490 - 19756642

Intron Length:

6153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTCTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

GCTATTTGAATT

Flanking Amino Acid:

IALEVQNSLKVLIGDKVDAS

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

71.2

0.53

70.3

31.9

Major PPT

78.2

0.63

0.8

77.1

31.7

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

52.2

0.15

1.4

65.52

39.6

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041030

19735146 - 19965890

230745

ENSAPLT00000010309

19611092 - 20050666

439575

ENSAPLT00000027055

19735146 - 20047479

312334

ENSAPLT00000038204

19735146 - 20047479

312334

ENSAPLT00000025954

19735146 - 20118710

383565

ENSAPLT00000025231

19735146 - 19968972

233827

ENSAPLT00000036333

19735515 - 20050666

315152

ENSAPLT00000010487

19748529 - 20047479

298951

ENSAPLT00000033545

19735515 - 20008807

273293