Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_1975095_1981173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1975095 - 1981173

Intron Length:

6079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTGG

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

EDLKGQAASQSASKLDKNTT

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

63.2

43.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

37.9

-1.4

3.1

49.7

46.5

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

SLC9A9

Ensembl Gene ID:

ENSAPLG00000000606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001069

1821682 - 2036835

215154

ENSAPLT00000045050

1821682 - 2036835

215154