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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19790521_19829779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19790521 - 19829779

Intron Length:

39259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

GAATCCTAAAAG

Flanking Amino Acid:

SPSLQQLTAENSSFLSEALF

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

81.9

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

87.6

0.85

0.6

83.5

Minor 5ss

31.5

-2.1

2.8

40.7

45.1

Minor BPS

51.6

-0

1.9

44.4

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027055

19735146 - 20047479

312334