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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19807785_19829779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19807785 - 19829779

Intron Length:

21995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GGAATTTTGATT

Flanking Amino Acid:

SPSLQQLTAESQSFNCVEKT

Intron Amino Acid Position:

534

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

1.1

81.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

31.5

-2.1

2.8

40.7

45.1

Minor BPS

50.4

0.09

1.2

61.09

36.6

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025231

19735146 - 19968972

233827

ENSAPLT00000038204

19735146 - 20047479

312334

ENSAPLT00000010487

19748529 - 20047479

298951

ENSAPLT00000036333

19735515 - 20050666

315152

ENSAPLT00000010309

19611092 - 20050666

439575

ENSAPLT00000033545

19735515 - 20008807

273293

ENSAPLT00000025954

19735146 - 20118710

383565

ENSAPLT00000041030

19735146 - 19965890

230745