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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19829900_19831971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19829900 - 19831971

Intron Length:

2072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAACAA

5'SS Class:

major

3'SS Sequence:

GTTCCTGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TGTGTATTAATA

Flanking Amino Acid:

GNIGSYEWAEDLKRVLQRNV

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

62.9

37.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

0.54

0.9

65.6

Minor 5ss

36.7

-1.5

3.1

47.2

48.2

Minor BPS

57.8

0.24

1.7

68.66

37.9

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010487

19748529 - 20047479

298951

ENSAPLT00000033545

19735515 - 20008807

273293

ENSAPLT00000010309

19611092 - 20050666

439575

ENSAPLT00000027055

19735146 - 20047479

312334

ENSAPLT00000041030

19735146 - 19965890

230745

ENSAPLT00000025954

19735146 - 20118710

383565

ENSAPLT00000038204

19735146 - 20047479

312334

ENSAPLT00000025231

19735146 - 19968972

233827

ENSAPLT00000036333

19735515 - 20050666

315152