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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19836589_19842875_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19836589 - 19842875

Intron Length:

6287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTTCATT

Flanking Amino Acid:

RCVPLQLPSTEKKIISLNIQ

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

100

1.24

0.5

100

Major PPT

79.1

0.65

76.1

37.6

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

67.5

0.63

1.7

86.64

33.8

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025231

19735146 - 19968972

233827

ENSAPLT00000036333

19735515 - 20050666

315152

ENSAPLT00000010487

19748529 - 20047479

298951

ENSAPLT00000033545

19735515 - 20008807

273293

ENSAPLT00000010309

19611092 - 20050666

439575

ENSAPLT00000027055

19735146 - 20047479

312334

ENSAPLT00000041030

19735146 - 19965890

230745

ENSAPLT00000025954

19735146 - 20118710

383565

ENSAPLT00000038204

19735146 - 20047479

312334