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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19843020_19873297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19843020 - 19873297

Intron Length:

30278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTATTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATTCACTAAATT

Flanking Amino Acid:

DPSTPGYASIDGSYRQHRLN

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

86.2

29.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.2

0.59

1.1

80.4

36.2

Minor 5ss

38.5

-1.3

2.8

49.8

40.3

Minor BPS

56.7

0.29

1.8

77.01

39.4

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025231

19735146 - 19968972

233827

ENSAPLT00000036333

19735515 - 20050666

315152

ENSAPLT00000010487

19748529 - 20047479

298951

ENSAPLT00000033545

19735515 - 20008807

273293

ENSAPLT00000010309

19611092 - 20050666

439575

ENSAPLT00000027055

19735146 - 20047479

312334

ENSAPLT00000041030

19735146 - 19965890

230745

ENSAPLT00000025954

19735146 - 20118710

383565

ENSAPLT00000038204

19735146 - 20047479

312334