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Intron Name: Anas_platyrhynchos_platyrhynchos_9_19913851_19957474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19913851 - 19957474

Intron Length:

43624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GTAACGTGAAAA

Flanking Amino Acid:

IKAENIQQIYRDLLQFSRED

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.6

31.9

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

77.9

0.63

0.9

69.5

41.6

Minor 5ss

43.1

-0.8

2.4

55.1

42.2

Minor BPS

44.4

-0.4

2.2

56.65

41.5

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025231

19735146 - 19968972

233827

ENSAPLT00000036333

19735515 - 20050666

315152

ENSAPLT00000010487

19748529 - 20047479

298951

ENSAPLT00000033545

19735515 - 20008807

273293

ENSAPLT00000010309

19611092 - 20050666

439575

ENSAPLT00000027055

19735146 - 20047479

312334

ENSAPLT00000041030

19735146 - 19965890

230745

ENSAPLT00000025954

19735146 - 20118710

383565

ENSAPLT00000038204

19735146 - 20047479

312334