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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20049059_20050551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20049059 - 20050551

Intron Length:

1493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTAAATTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTCTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.4

0.41

1.1

65.1

44.6

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

90.1

1.34

0.7

99.4

21.6

Associated Gene:

Gene:

NAALADL2

Ensembl Gene ID:

ENSAPLG00000010077

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036333

19735515 - 20050666

315152

ENSAPLT00000010309

19611092 - 20050666

439575