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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20475761_20476207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20475761 - 20476207

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCATTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTCTATTCATTT

Flanking Amino Acid:

YLNIYVPTEDVKRISKECAR

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.8

78.1

26.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.2

0.77

0.8

81.3

35.4

Minor 5ss

34.2

-1.8

2.8

36.8

41.9

Minor BPS

47.5

-0.1

1.9

68.65

42.9

Associated Gene:

Gene:

NLGN1

Ensembl Gene ID:

ENSAPLG00000010082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036480

20176941 - 20477013

300073