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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20634126_20648454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20634126 - 20648454

Intron Length:

14329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTGTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

CTTTAGTAAACA

Flanking Amino Acid:

AAAQFATALELCSKGVATGK

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

40.8

Major BPS

75.9

0.64

66.1

40.5

Major PPT

69.5

0.44

1.1

70.7

39.1

Minor 5ss

31.1

-2.2

3.6

47.6

47.8

Minor BPS

47.5

-0.1

2.5

67.79

44.7

Associated Gene:

Gene:

SPATA16

Ensembl Gene ID:

ENSAPLG00000010186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010610

20633523 - 20707996

74474