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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20658971_20670218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20658971 - 20670218

Intron Length:

11248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTCTGG

5'SS Class:

major

3'SS Sequence:

CTTTTGTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

CTCTCCTTATAC

Flanking Amino Acid:

RCLERYSEAARSAMIADYMY

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.6

Major BPS

74.9

0.62

81.3

29.9

Major PPT

78.8

0.65

0.9

78.1

Minor 5ss

42.2

-0.9

3.1

56.6

47.6

Minor BPS

59.2

0.27

1.8

67.25

44.3

Associated Gene:

Gene:

SPATA16

Ensembl Gene ID:

ENSAPLG00000010186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010610

20633523 - 20707996

74474