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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20686233_20692600_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20686233 - 20692600

Intron Length:

6368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

CCTGAGAGAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TCTCCTCTAACC

Flanking Amino Acid:

MDFIRSTKLTDNFCACSRVI

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

77.2

32.8

Major BPS

72.3

0.55

73.3

28.9

Major PPT

50.3

0.01

1.1

40.8

Minor 5ss

36.1

-1.6

2.9

47.9

41.8

Minor BPS

62.1

0.36

1.7

72.58

38.5

Associated Gene:

Gene:

SPATA16

Ensembl Gene ID:

ENSAPLG00000010186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010610

20633523 - 20707996

74474