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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20692766_20697047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20692766 - 20697047

Intron Length:

4282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTTGGTGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAATTTTTATCT

Flanking Amino Acid:

QDISQQDAELLQSLMADAMD

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

79.6

35.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.1

0.41

61.2

40.1

Minor 5ss

-1.1

3.1

54.5

43.9

Minor BPS

63.6

0.51

1.5

77.42

39.1

Associated Gene:

Gene:

SPATA16

Ensembl Gene ID:

ENSAPLG00000010186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010610

20633523 - 20707996

74474