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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20697132_20707873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20697132 - 20707873

Intron Length:

10742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTCTTTGTAATT

Flanking Amino Acid:

KERVWNKIEKIGIIEDFLYQ

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.9

33.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

0.9

74.9

38.8

Minor 5ss

34.1

-1.8

44.4

43.1

Minor BPS

58.2

0.34

78.3

39.3

Associated Gene:

Gene:

SPATA16

Ensembl Gene ID:

ENSAPLG00000010186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010610

20633523 - 20707996

74474