Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_20723410_20725029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20723410 - 20725029

Intron Length:

1620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGTATG

5'SS Class:

major

3'SS Sequence:

CTTTAATTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATT

Flanking Amino Acid:

KKVLDIRETEDCHKAFALVV

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.3

74.4

41.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

79.4

0.66

0.8

35.3

Minor 5ss

40.8

-1

2.6

51.1

45.4

Minor BPS

90.6

1.35

0.7

99.65

21.1

Associated Gene:

Gene:

ECT2

Ensembl Gene ID:

ENSAPLG00000010339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019315

20718868 - 20741470

22603

ENSAPLT00000010847

20719199 - 20741442

22244