Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_20726848_20727037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20726848 - 20727037

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTCTACCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AAATGCTTAATG

Flanking Amino Acid:

DVVYEVDGCPANLLSSHRSL

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

67.4

0.39

0.9

62.2

33.5

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

57.8

0.11

1.8

59.95

41.9

Associated Gene:

Gene:

ECT2

Ensembl Gene ID:

ENSAPLG00000010339

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019315

20718868 - 20741470

22603

ENSAPLT00000010847

20719199 - 20741442

22244