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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20735206_20735387_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20735206 - 20735387

Intron Length:
182

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTTAGTACT

5'SS Class:
strong_major

3'SS Sequence:
CTTTTTCCTTTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AGTTATGTAATT

Flanking Amino Acid:
LKKLYVVKQEWFWGSIQMDA

Intron Amino Acid Position:
305

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.7
0.84
1.1
85.6
30.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
86.5
0.82
0.6
85.6
21.6

Minor 5ss
34.7
-1.7
2.6
44.5
42.8

Minor BPS
49.4
0.03
2.1
71.82
39.5

Associated Gene:

Gene:
ECT2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20718868 - 20741470
22603

20719199 - 20741442
22244