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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20736727_20737361_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20736727 - 20737361

Intron Length:
635

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTATGTAAG

5'SS Class:
major

3'SS Sequence:
TCCAATTTTGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTTAT

U12 Branch Point Sequence:
CTTGTTACAATT

Flanking Amino Acid:
ANSTHGDKFRIAVSLGTPIM

Intron Amino Acid Position:
198

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.4
0.43
1.1
64.3
41.6

Major BPS
79.9
0.74
0.9
69.7
37.1

Major PPT
74.3
0.55
0.9
68.9
36.7

Minor 5ss
42.4
-0.8
2.5
47
42.7

Minor BPS
45.5
-0.2
1.8
63.82
41.6

Associated Gene:

Gene:
ECT2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20719199 - 20741442
22244

20718868 - 20741470
22603