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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20739244_20740128_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20739244 - 20740128

Intron Length:
885

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTATGTCAT

5'SS Class:
strong_major

3'SS Sequence:
CCCTCCTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGAAT

U12 Branch Point Sequence:
GTTTGAATAATG

Flanking Amino Acid:
EKLIKSIIHMEIKVPYIKTD

Intron Amino Acid Position:
102

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.1
0.71
1
72.3
38.6

Major BPS
74.6
0.61
1.4
84
34.5

Major PPT
73.2
0.52
0.8
64.5
30.9

Minor 5ss
42.1
-0.9
2.9
55.1
43.5

Minor BPS
45.5
-0.4
2.2
58.41
43.1

Associated Gene:

Gene:
ECT2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20718868 - 20741470
22603