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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20740403_20741312_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
20740403 - 20741312

Intron Length:
910

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGATGTGA

5'SS Class:
major

3'SS Sequence:
TCTCTATAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTGAA

U12 Branch Point Sequence:
TTCTCTATAAAC

Flanking Amino Acid:
EFPGSVLVVEEEMPQIETRV

Intron Amino Acid Position:
44

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.7
0.58
1
64.6
37.7

Major BPS
79.4
0.73
0.9
69.6
37.5

Major PPT
70.5
0.46
1
66.6
37.6

Minor 5ss
30.7
-2.2
3.2
38.6
46.4

Minor BPS
60.5
0.31
1.7
72.43
38.5

Associated Gene:

Gene:
ECT2

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20718868 - 20741470
22603

20719199 - 20741442
22244