Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_20785995_20789069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20785995 - 20789069

Intron Length:

3075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGCG

5'SS Class:

major

3'SS Sequence:

CCTTCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACAAAT

U12 Branch Point Sequence:

AGGTGACAAATT

Flanking Amino Acid:

FLYFTNELKQLWDMYSENSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.4

62.9

40.4

Major BPS

51.7

0.04

1.2

59.2

35.9

Major PPT

78.5

0.64

0.8

72.5

32.2

Minor 5ss

-2.6

3.1

32.7

42.2

Minor BPS

37.1

-0.9

2.2

52.78

42.3

Associated Gene:

Gene:

TNFSF10

Ensembl Gene ID:

ENSAPLG00000022295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032692

20785869 - 20793584

7716