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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20836334_20849639_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20836334 - 20849639

Intron Length:

13306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAAG

5'SS Class:

strong_major

3'SS Sequence:

AAAGCAGTAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

AAAGCAGTAATA

Flanking Amino Acid:

AAAQYCCRLQLGDGIGDGPV

Intron Amino Acid Position:

839

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

71.3

40.1

Major BPS

77.7

0.69

30.2

Major PPT

48.1

-0.1

37.2

38.8

Minor 5ss

37.7

-1.4

3.1

47.3

48.3

Minor BPS

43.5

-0.5

2.2

52.98

39.1

Associated Gene:

Gene:

FNDC3B

Ensembl Gene ID:

ENSAPLG00000012065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019698

20816599 - 20955213

138615

ENSAPLT00000012637

20816599 - 20955213

138615