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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20860112_20860773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20860112 - 20860773

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTTACTGGAATT

Flanking Amino Acid:

YTLEIQEEDNDSVFHPKYTG

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

84.7

0.78

0.7

30.8

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

50.3

0.09

2.1

77.29

39.6

Associated Gene:

Gene:

FNDC3B

Ensembl Gene ID:

ENSAPLG00000012065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040776

20816599 - 20955213

138615

ENSAPLT00000019698

20816599 - 20955213

138615

ENSAPLT00000012637

20816599 - 20955213

138615