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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20863601_20863654_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20863601 - 20863654

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTCTCTTT

5'SS Class:

weak_major

3'SS Sequence:

GTTACTTTGGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

TTACTTTGGAAG

Flanking Amino Acid:

TLQWKLSNYRCQKHCKLTKL

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.2

56.6

42.8

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

61.6

0.26

1.2

63.8

41.8

Minor 5ss

45.3

-0.5

3.1

62.7

43.7

Minor BPS

-0.5

1.6

49.97

37.7

Associated Gene:

Gene:

FNDC3B

Ensembl Gene ID:

ENSAPLG00000012065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019698

20816599 - 20955213

138615