Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_20871937_20874974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20871937 - 20874974

Intron Length:

3038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

AAACTTATAACC

Flanking Amino Acid:

DLRPATDYHVRVYAMYNSVK

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.1

30.7

Major BPS

77.9

0.69

78.3

31.3

Major PPT

83.2

0.75

0.8

77.4

35.8

Minor 5ss

34.1

-1.8

2.8

39.6

46.4

Minor BPS

49.2

-0

1.5

57.22

34.3

Associated Gene:

Gene:

FNDC3B

Ensembl Gene ID:

ENSAPLG00000012065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040776

20816599 - 20955213

138615

ENSAPLT00000019698

20816599 - 20955213

138615

ENSAPLT00000012637

20816599 - 20955213

138615