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Intron Name: Anas_platyrhynchos_platyrhynchos_9_20875035_20877292_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20875035 - 20877292

Intron Length:

2258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGTA

5'SS Class:

major

3'SS Sequence:

TTCTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCATAATTAATT

Flanking Amino Acid:

GRDGKYKIIYSGEELEYNLK

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

75.2

35.1

Major BPS

100

1.24

0.5

100

Major PPT

91.9

0.94

0.6

88.3

21.4

Minor 5ss

39.6

-1.2

3.5

48.2

Minor BPS

58.7

0.35

1.8

75.18

41.4

Associated Gene:

Gene:

FNDC3B

Ensembl Gene ID:

ENSAPLG00000012065

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012637

20816599 - 20955213

138615

ENSAPLT00000040776

20816599 - 20955213

138615

ENSAPLT00000019698

20816599 - 20955213

138615