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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21069969_21070072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21069969 - 21070072

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GCTGTGCTAACG

Flanking Amino Acid:

SEVLNDPKGAACIPFSAIYH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

76.5

0.6

0.9

69.6

36.7

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

41.6

-0.7

2.3

47.75

45.6

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930