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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21070573_21071316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21070573 - 21071316

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAGAC

U12 Branch Point Sequence:

GTAGACTCGACA

Flanking Amino Acid:

AFVRIPIPTRSHTVRRQSIK

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

54.1

0.1

1.2

52.4

43.3

Major PPT

86.3

0.82

0.7

80.9

24.2

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

46.8

-0.2

1.9

57.49

41.4

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930