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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21071426_21072781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21071426 - 21072781

Intron Length:

1356

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGAATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

GATGTTTGAATT

Flanking Amino Acid:

VREEHFSSRRKQLEDYLTKI

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

74.9

0.56

67.2

42.8

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

51.6

0.13

1.5

65.99

39.1

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012775

21069783 - 21102712

32930

ENSAPLT00000038990

21048938 - 21102712

53775