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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21072848_21077456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21072848 - 21077456

Intron Length:

4609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTCTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TTTTCTTTCCCC

Flanking Amino Acid:

MPMYRNYHGTMEFIGVSQLS

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

72.1

39.4

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

37.3

-1.4

2.7

41.7

Minor BPS

46.5

-0.2

3.6

77.59

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930