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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21077516_21078036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21077516 - 21078036

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CCCTCCTGACTG

Flanking Amino Acid:

SFIHDLGPKGMEGMVMKRSG

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.9

34.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

76.5

0.6

0.8

69.5

31.2

Minor 5ss

38.9

-1.2

53.8

43.7

Minor BPS

46.8

-0.3

1.8

47.16

46.5

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930