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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21078130_21080012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21078130 - 21080012

Intron Length:

1883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGCTG

5'SS Class:

major

3'SS Sequence:

CTCTGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

AGACGCTCACCT

Flanking Amino Acid:

QGRMCYRWSKRWLVVKDSFL

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

57.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

79.2

0.66

0.8

31.9

Minor 5ss

33.4

-1.9

3.6

47.4

Minor BPS

42.6

-0.4

2.1

58.16

44.1

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930