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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21080166_21080836_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21080166 - 21080836

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTGGTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

ATTGGTTTTACA

Flanking Amino Acid:

KYGLQIDNLSRSLILKCTSY

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

0.65

1.1

77.4

37.3

Major PPT

79.9

0.67

0.9

72.7

41.8

Minor 5ss

35.2

-1.7

49.5

46.3

Minor BPS

48.2

-0.1

2.1

64.86

41.7

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930