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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21083166_21085546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21083166 - 21085546

Intron Length:

2381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TGATTTCCGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTCTTCTTGATT

Flanking Amino Acid:

RLDCILKRKAQQGVKIFVML

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

66.4

39.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

69.9

0.45

65.7

40.9

Minor 5ss

34.2

-1.8

3.2

45.7

43.5

Minor BPS

76.2

0.91

1.1

86.1

34.3

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930