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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21085658_21086873_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21085658 - 21086873

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CTCCTGTCCACA

Flanking Amino Acid:

TLMHLHPNIKVMRHPDHVSS

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

35.3

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

73.7

0.53

0.8

67.4

32.6

Minor 5ss

38.5

-1.3

3.1

50.7

45.7

Minor BPS

37.9

-0.9

2.4

47.76

42.9

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930