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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21089075_21090456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21089075 - 21090456

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAG

U12 Branch Point Sequence:

TTTTGTTTGCCC

Flanking Amino Acid:

SKQGLTEPQEDKGSIRSLKT

Intron Amino Acid Position:

714

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

-0

1.8

57.1

49.4

Major PPT

65.8

0.36

1.1

61.5

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

43.5

-0.5

3.6

73.02

38.9

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775