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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21090586_21090843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21090586 - 21090843

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TTTGTCTGAAGA

Flanking Amino Acid:

DWVQLDKPFADFIDRYTTPR

Intron Amino Acid Position:

630

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

79.1

0.65

0.8

72.9

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

55.9

0.18

1.9

71.44

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930