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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21090963_21091101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21090963 - 21091101

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAGG

5'SS Class:

major

3'SS Sequence:

TCCCCCCCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TCTTCAAGGAGT

Flanking Amino Acid:

HFIQRWNFTKIMKPKYRSLS

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.4

45.8

Major BPS

78.2

0.7

79.9

32.6

Major PPT

66.1

0.36

0.9

61.5

Minor 5ss

24.8

-2.9

3.1

30.1

43.2

Minor BPS

42.9

-0.4

2.2

66.2

44.2

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930