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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21095104_21095752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21095104 - 21095752

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

CATTATCTGACA

Flanking Amino Acid:

ENSKHYIYIENQFFISCADD

Intron Amino Acid Position:

745

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.5

32.8

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

83.1

0.74

0.8

77.3

31.5

Minor 5ss

26.6

-2.7

31.8

42.6

Minor BPS

48.1

-0.1

1.8

60.83

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930