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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21095842_21097417_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21095842 - 21097417

Intron Length:

1576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCTCT

5'SS Class:

weak_major

3'SS Sequence:

CCTGTCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAATAT

U12 Branch Point Sequence:

TTTTCCCCAACC

Flanking Amino Acid:

AIAQRILKAHRENKRFRVYV

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.2

72.3

40.1

Major BPS

55.2

0.13

1.2

41.2

Major PPT

77.5

0.62

0.8

73.5

31.6

Minor 5ss

57.2

0.24

2.5

74.8

41.2

Minor BPS

67.7

0.54

1.9

84.14

34.7

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930