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Intron Name: Anas_platyrhynchos_platyrhynchos_9_21097982_21099114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21097982 - 21099114

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCGTTCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCTCTCACATCC

Flanking Amino Acid:

NSILGQLKAEVGDKWINYIS

Intron Amino Acid Position:

829

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

72.7

0.56

30.1

Major PPT

78.2

0.63

0.8

75.7

32.8

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

40.7

-0.7

1.9

48.36

41.5

Associated Gene:

Gene:

PLD1

Ensembl Gene ID:

ENSAPLG00000012211

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038990

21048938 - 21102712

53775

ENSAPLT00000012775

21069783 - 21102712

32930